Table of contents
No headers | Target Information | | Name | {{ args.name}} | {{ web.link{uri: "http://ffas.burnham.org/XtalPred-cgi/result.pl?dir=db/JCSG/wil/"..params['targetId'], text: 'XtalPred result (for one isoform)', title: params['targetId'], target: "_blank"} }} | | Length | {{ params['length'] }} | Gravy Index | {{ params['gravIx'] }} | | Instability Index (II) | {{ params['instabIx'] }} | Isoelectric Point (pI) | {{ params['isopt'] }} | | Coiled coils | {{ params['coil'] }} | Longest disordered region | {{ params['longdisorder'] }} | | % of coil structure | {{ params['pcntcoil'] }} | Transmembrane helices (TM) | {{ params['transhelix'] }} | | Signal Peptides (SP) | {{ params['sigpeptide'] }} | Insertions Score | {{ params['insertscore'] }} | | Domains, Predictions | {{params['domain'] }} | | Sequence | {{params['seq']}} | | | {{web.link('http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=(none)&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&HITLIST_SIZE=500&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&QUERY='..params['seq'], 'BLAST', 'BLAST', '_blank');}} {{web.link('http://ffas.burnham.org/ffas-cgi/cgi/ffas.pl?seq='..params['seq'], 'FFAS', '', '_blank'); }} | | {{Template.constructList{cList:constList}}} | {{Template.complexPartners{cmList:cmplxList, rcmlist: rcmplxlist}}} |
if ( params.uniprot != nil && params.uniprot != '' ) {
note.link( "sameAs", "UNIPROT:"..params.uniprot, false);
note.import( 'uniprot:'..params.uniprot );
template.uniprot{ uniprot:params.uniprot };
}
{{ web.image("http://files.topsan.org/cdd/"..page.title..".png") }}
var domainparams = myproteins.recordlist('select * from domains where targetName like \'%'..params['name']..'%\'');
var newseq = string.replace(params['seq'], ' ', '');
var pdbparams = myproteins.recordlist('select * from pdbdomainsWil where targetName like \'%'..params['name']..'%\' order by start');
domain.viewer(domainparams, pdbparams, #newseq, params['name'], 'wil');
note.link('alias', params['name'], false);
