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The Open Protein Structure Annotation Network
PDB Keyword
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1npd

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    Title The 2.3-A crystal structure of the shikimate 5-dehydrogenase orthologue YdiB from Escherichia coli suggests a novel catalytic environment for an NAD-dependent dehydrogenase. J.Biol.Chem. 278 19176-19182 2003
    Site NESGC
    PDB Id 1npd Target Id ER24
    Molecular Characteristics
    Source Escherichia coli
    Alias Ids TPS8837,3.40.192.10, PF08501, PF01488, 3.40.50.720 Molecular Weight 31226.14 Da.
    Residues 288 Isoelectric Point 5.03
    Sequence mdvtakyeliglmaypirhslspemqnkalekaglpftymafevdndsfpgaieglkalkmrgtgvsmp nkqlaceyvdeltpaaklvgaintivnddgylrgyntdgtghiraikesgfdikgktmvllgaggasta igaqgaieglkeiklfnrrdeffdkalafaqrvnentdcvvtvtdladqqafaealasadiltngtkvg mkpleneslvndisllhpgllvtecvynphmtkllqqaqqagcktidgygmllwqgaeqftlwtgkdfp leyvkqvmgfga
      BLAST   FFAS

    Structure Determination
    Method XRAY Chains 2
    Resolution (Å) 2.30 Rfree 0.274
    Matthews' coefficent 2.12 Rfactor 0.217
    Waters 319 Solvent Content 41.51

    Ligand Information
    Ligands NAD (NICOTINAMIDE-ADENINE-DINUCLEOTIDE) x 2
    Metals

    Jmol

     

    Protein Summary


    Ligand Summary

    Reviews

    References

     

    No references found.

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